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Publications per year (2012-2022)

2023

Smirnov A
Research progress in RNA-binding proteins
Int J Mol Sci, 24:58 | doi

2022

Burzio VA, Barrey E, Leucci E, Entelis N, Hollander JM and Das S
Editorial: Role of mitochondria-associated noncoding RNAs in intracellular communication
Front Physiol, 13:980674 | doi

Caudal E, Friedrich A, Jallet A, Garin M, Hou J, Schacherer J.
Loss-of-function mutation survey revealed that genes with background-dependent fitness are rare and functionally related in yeast
PNAS, 119(37):e2204206119 | doi

Chery M, Drouard L 
Plant tRNA functions beyond their major role in translation
J Exp Bot, 8:erac483 | doi

Chevigny N, Weber-Lotfi F, Le Blevenec A, Nadiras C, Fertet A, Bichara M, Erhardt M, Dietrich A, Raynaud C, Gualberto JM
RADA-dependent branch migration has a predominant role in plant mitochondria and its defect leads to mtDNA instability and cell cycle arrest
PLOS Genetics 18(5):e1010202 | doi

Cognat V, Pawlak G, Pflieger D, Drouard L
PlantRNA 2.0: an updated database dedicated to tRNAs of photosynthetic eukaryotes
Plant J, 112(4):1112-1119 | doi

De Chiara M, Barré BP, Persson K,  Irizar A, Vischioni C, Khaiwal S, Stenberg S, Amadi OC, Žun G, Doberšek K, Taccioli C, Schacherer J, Petrovič U, Warringer J, Liti G
Domestication reprogrammed the budding yeast life cycle
Nat Ecol Evol 6: 448–460 | doi

Dutta A, Dutreux F, Schacherer J,
Loss of Heterozygosity Spectrum Depends on Ploidy Level in Natural Yeast Populations
Molecular Biology and Evolution, 39(11):msac214 | doi

Grob G, Hemmerle M, Yakobov N, Mahmoudi N, Fischer F, Senger B, and Becker HD
tRNA-dependent addition of amino acids to cell wall and membrane components
Biochimie, 203:93-105 | doi

Harrouard J, Eberlein C, Ballestra P, Dols-Lafargue M, Masneuf-Pomarede I, Miot-Sertier C, Schacherer J, Albertin W
Brettanomyces bruxellensis: overview of the genetic and phenotypic diversity of an anthropized yeast
Molecular Ecology, 00:1-22 | doi

Hemmerle M, Senger B, Rago JD, Kucharczyk R, Becker HD
Visualizing Mitochondrial Importability of a Protein Using the Yeast Bi-Genomic Mitochondrial-Split-GFP Strain and an Ordinary Fluorescence Microscope
Methods Mol Biol, 2497:255-267 | doi

Jeandard D, Smirnova A, Fasemore AM, Coudray L, Entelis N, Förstner KU, Tarassov I, Smirnov A 
CoLoC-seq probes the global topology of organelle transcriptomes
Nucleic Acids Research:gkac1183 | doi

Peter J, Friedrich A, Liti G, Schacherer J.
Extensive simulations assess the performance of genome-wide association mapping in various Saccharomyces cerevisiae subpopulations
Phil Trans R Soc B 377:20200514 | doi

Saada OA, Friedrich A, Schacherer J 
Towards accurate, contiguous and complete alignment-based polyploid phasing algorithms
Genomics, 114(3):110369 | doi

Saada OA, Tsouris A, Large C, Friedrich A, Dunham MJ, Schacherer J.
Phased polyploid genomes provide deeper insight into the multiple origins of domesticated Saccharomyces cerevisiae beer yeasts
Curr Biol 32(6):1350-1361 | doi

Smirnov A
How global RNA-binding proteins coordinate the behaviour of RNA regulons: an information approach
Comput Struct Biotechnol J, 20:6317-38 | doi

Tsouris A, Schacherer J, Ishchuk OP
RNA Interference (RNAi ) as a Tool for High-Resolution Phenotypic Screening of the Pathogenic Yeast Candida glabrata
In: Devaux, F. (eds) Yeast Functional Genomics. Methods in Molecular Biology, 2477:313-330 | doi 

Verdura E, Senger B, Raspall-Chaure M, Schlüter A, Launay N, Ruiz M, Casasnovas C, Rodriguez-Palmero A, Macaya A, Becker HD, Pujol A
Loss of seryl-tRNA synthetase (SARS1) causes complex spastic paraplegia and cellular senescence
J Med Genet, 59(12):1227-1233 | doi

Yakobov N, Mahmoudi N, Grob G, Yokokawa D, Saga Y, Kushiro T, Worrell D, Roy H, Schaller H, Senger B, Huck L, Riera Gascon G, Becker HD, Fischer F. 
RNA-dependent synthesis of ergosteryl-3β-O-glycine in Ascomycota expands the diversity of steryl-amino acids
J Biol Chem 298(3):101657 | doi

2021

Chevigny N, Schatz-Daas D, Lotfi F and Gualberto JM
DNA Repair and the Stability of the Plant Mitochondrial Genome
International Journal of Molecular Sciences, 21(1): 328 | doi

Fertet A., Graindorge S., Koechler S., De Boer G.J., Guilloteau-Fonteny E. and Gualberto J.M.
Sequence of the mitochondrial genome of Lactuca virosa suggests an unexpected role in Lactuca sativa’s evolution
Frontiers in Plant Science, 12:697136 | doi

Gobert A, Quan Y, Arrivé M, Waltz F, Da Silva N, Jomat L, Cohen M, Jupin I, Giegé P.
Towards plant resistance to viruses using protein-only RNase P
Nat Commun. 12(1):1007 | doi

Salinas-Giegé T., Ubrig E. and Maréchal-Drouard L.
Cyanophora paradoxa mitochondrial tRNAs play a double game
 
Plant Journal
, 106(4):1105-11152021
| doi

Schatz-Daas D, Fertet A, Lotfi F and Gualberto JM
Assessment of mitochondrial DNA copy number, stability and repair in Arabidopsis
In: Olivier Van Aken; Allan G. Rasmusson (ed) Plant Mitochondria - Methods and Protocols. Methods in Molecular Biology, vol 2363. Springer US.

Waltz F, Corre N, Hashem Y and Giegé P
Specificities of the plant mitochondria translation apparatus
.
Mitochondrion, 53:30-37 | doi

Waltz,F, Giegé P and Hashem Y
Purification and Cryo-electron Microscopy Analysis of Plant Mitochondrial Ribosomes.
Bio-protocol
11(15): e4111. | doi

Waltz F, Salinas-Giegé T, Englmeier R, Meichel H. Soufari H. Kuhn L, Pfeffer S, Förster F, Engerl B, Giegé P, Maréchal-Drouard L. and Hashem Y.
How to build a ribosome from RNA fragments in Chlamydomonas mitochondria
Nature Communications
, 12:7176, 2021. doi

Warren J, Salinas-Giegé T, Hummel G, Coots N, Svendsen J, Brown K, Maréchal-Drouard L and Sloan D
Combining tRNA sequencing methods to characterize plant tRNA expression and post-transcriptional modification
RNA Biology, 18:64-78 | doi

Warren J., Salinas-Giegé T., Triant D., Taylor D., Drouard L. and Sloan D.
Rapid shifts in mitochondrial tRNA import in a plant lineage with extensive mitochondrial tRNA gene loss
Molecular Biology and Evolution
,

Shebanova R, Nikitchina N, Shebanov N, Mekler V, Kuznedelov K, Ulashchik E, Vasilev R, Sharko O, Shmanai V, Tarassov I, Severinov K, Entelis N, Mazunin I 
Efficient target cleavage by Type V Cas12a effectors programmed with split CRISPR RNA
Nucleic Acids Res, 50:1162-73 | doi

Meschaninova MI, Entelis NS, Chernolovskaya EL, Venyaminova AG
A versatile solid-phase approach to the synthesis of oligonucleotide conjugates with biodegradable hydrazone linker
Molecules, 26:2119 | doi

Gerovac M, Vogel J, Smirnov A
The world of stable ribonucleoproteins and its mapping with Grad-seq and related approaches
Front Mol Biosci, 8:661448 | doi

Liao Z, Schelcher C, Smirnov A 
YbeY, éminence grise of ribosome biogenesis
Biochem Soc Trans, 49:727-45 | doi

Smirnova A, Richert L, Smirnov A, Mély Y, Tarassov I
Suborganellar localisation of mitochondrial proteins and transcripts in human cells
Methods Mol Biol, 2277:157-73 | doi

Dovydenko I, Meschaninova M, Heckel AM, Tarassov I, Venyaminova A, Entelis N
Lipophilic Conjugates for Carrier-Free Delivery of RNA Importable into Human Mitochondria
Methods Mol Biol, 2277:49-67 | doi

Yokokawa D, Tatematsu S, Takagi R, Saga Y, Roy H, Fischer F, Becker HD, Kushiro T.
Synthesis of aminoacylated ergosterols: A new lipid component of fungi
Steroids, 169:108823 | doi

Enkler L, Rinaldi B, de Craene JO, Hammann P, Nureki O, Senger B, Friant S, Becker HD
Cex1 is a component of the COPI intracellular trafficking machinery
Biol Open, 10(3):bio058528 | doi

2020

Bader G, Enkler L, Araiso Y. Hemmerle M, Binko K, Baranowska E, De Craene OJ, Ruer-Laventie J, Pieters J, Tribouillard-Tanvier D, Senger B, di Rago J-P, Friant S, Kucharczyk R & Becker HD
Assigning mitochondrial localization of dual localized proteins using a yeast Bi-Genomic Mitochondrial-Split-GFP.

Elife 2020; 9:e56649. doi

Fernandes de Abreu D, Salinas-Giegé T, Maréchal-Drouard L. and Remy JJ
Alanine tRNA translate environment into behavior in Caenorabditis elegans
Frontiers in Cellular and Developmental Biology, 8:1-26.DOI

Flood P, Theeuwen T, Schneeberger K, Keizer P, Kruijer W, Severing E, Kouklas E, Hageman J, Wijfjes R,  Calvo-Baltanas V, Becker F, Schnabel S, Willems L, Ligterink W, Van Arkel J, Mumm R, Gualberto JM, Savage L, Kramer D, Keurentjes J, Van Eeuwijk F, Koornneef M, Harbinson J, Aarts M and Wijnker E
Reciprocal cybrids reveal how organellar genomes affect plant phenotypes
Nature Plants, 6:13-21 doi

Hemmerle M, Wendeenbaum M, Grob G, Yakobov N, Mahmoudi-Kaidi N, Senger B, Debard S, Fisher F & Becker HD
Non-canonical inputs and outputs of tRNA aminoacylation.
The Enzymes: Biology of Aminoacyl-tRNA Synthetases Volume 48. 117-147 doi

Hemono M, Ubrig E, Azeredo K, Salinas-Giegé T, Maréchal-Drouard L and Duchêne AM
Arabidopis Voltage-Dependent Anion Channels (AtVDACs): overlapping and specific functions in mitochondria
Cells, 9:1023, 2020. doi

Hummel G, Berr A, Graindorge S, Cognat V, Ubrig E, Pflieger D, Molinier J and Maréchal-Drouard L
Epigenetic silencing of clustered tDNAs in Arabidopsis
Nucleic Acids Research, 48:10297-10312, 2020. | doi

Lalande S, Chery M, Ubrig E, Hummel G, Kubina J, Geldrecih A, and Maréchal-Drouard L
Transfection of small non-coding RNAs into Arabidopsis thaliana protoplasts
Methods in Molecular Biology, 413-429, 2020. | doi

Lalande S, Merret R, Salinas-Giegé T, Drouard L
Arabidopsis tRNA-derived fragments as potential modulators of translation.
RNA Biol, RNA Biol,5:1-12. doi

Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis

Proc. Nat. Acad. Sci. Nov 2020, 202011301; doi

Summer S, Smirnova A, Gabriele A, Toth U, Fasemore AM, Förstner KU, Kuhn L, Chicher J, Hammann P, Mitulović G, Entelis N, Tarassov I, Rossmanith W, Smirnov A
YBEY is an essential biogenesis factor for mitochondrial ribosomes.
Nucleic Acids Res.  17. pii: gkaa148. doi

Waltz F, Giegé P
Striking diversity of mitochondria-specific translation processes across eukaryotes.
Trends Biochem Sci. 45:149-162. doi

Waltz F, Soufari H, Bochler A, Giegé P, Hashem Y
Cryo-EM structure of the RNA-rich plant mitochondrial ribosome.
Nat Plants
. 6:377-383. doi

Yakobov N, Fischer F, Mahmoudi N, Saga Y, Grube C, Roy H, Senger B, Grob G, Tatematsu S, Yokokawa D, Mouyna I. Latgé J-P, Nakajima H, Kushiro T & Becker HD 
RNA-dependent sterol modification in fungi. 
Proc. Natl. Acad. Sci. U.S.A.  doi

2019

Bouchoucha A, Waltz F, Bonnard G, Arrivé M, Hammann P, Kuhn L, Schelcher C, Zuber H, Gobert A, Giegé P (2019)
Determination of protein-only RNase P interactome in Arabidopsis mitochondria and chloroplasts identifies a complex between PRORP1 and another NYN domain nuclease
Plant Journal
,  Abstract

Fairhead C, Fischer G, Liti G, Neuveglise C, Schacherer J (2019)
Andre Goffeau's imprinting on second generation yeast "genomologists".
Yeast. doi:10.1002/yea.3377 Abstract

Fournier T, Abou Saada O,Hou J, Peter J, Caudal E, Schacherer J (2019)
Extensive impact of low-frequency variants on the phenotypic landscape at population-scale
eLife 2019;8:e49258 doi

Giegé P and Maréchal-Drouard L (2019)
IUBMB Life Special Issue on tRNA Biology
IUBMB Life, 71: 1064-1065.  Abstract

Gobert A, Bruggeman M, Giegé P (2019)
Involvement of PIN-like domain nucleases in tRNA processing and translation regulation.
IUBMB Life, 71: 1117-1125. Abstract

González-Serrano LE, Chihade JW , Marie Sissler M (2019)
When a common biological role does not imply common disease outcomes: Disparate pathology linked to human mitochondrial aminoacyl-tRNA synthetases
J Biol Chem. 294(14):5309-5320. doi: 10.1074/jbc.REV118.002953  Abstract

Hummel G, Warren J, Drouard L (2019)
The multi-faceted regulation of nuclear tRNA gene transcription
IUBMB Life
,71(8):1099-1108. Abstract

Jeandard D, Smirnova A, Tarassov I, Barrey E, Smirnov A, Entelis N 
Import of non-coding RNAs into human mitochondria: a critical review and emerging approaches.
Cells 8, 286; doi:10.3390/cells8030286  Abstract

Megel C, Hummel G, Ubrig E, Cognat V, Morelle G., Salinas-Giegé T, Duchêne AM, Maréchal-Drouard L (2019)
Plant RNases T2, but not Dicer-like proteins, are major players of tRNA-derived fragments biogenesis
Nucleic Acids Research
, 47(2):941-952 Abstract

Meyer M, Walbott H, Olieric V, Kondo J, Costa M and Masquida B
Conformational adaptation of UNCG loops upon crowding.
RNA; in press Abstract

Niazi AK, Delannoy E, Iqbal RK, Mileshina D, Val R, Gabryelska M, Wyszko E, Soubigou-Taconnat L, Szymanski M, Barciszewski J, Weber-Lotfi F, Gualberto JM, Dietrich (2019)
Mitochondrial Transcriptome Control and Intercompartment Cross-Talk During Plant Development.
Plant J. 97(3):430-446. doi: 10.1111/tpj.14128. Abstract

Niazi AK, Delannoy E, Iqbal RK, Mileshina D, Val R, Gabryelska M, Wyszko E, Soubigou-Taconnat L, Szymanski M, BarChevigny N, Schatz-Daas D, Lotfi F and Gualberto JM
DNA repair and the stability of the plant mitochondrial genome
International Journal of Molecular Sciences, 21:328

Pedroza-Garcia J., Nájera-Martinez M, Mazubert C, Aguilera-Alvarado P, Drouin-Wahbie J, Sánchez-Nieto S, Gualberto JM, Raynaud C, Plasencia J. (2019)
Role of pyrimidine salvage pathway in the maintenance of the organellar and nuclear genome integrity
Plant Journal
, 97(3):430-446 Abstract

Scheidecker S, Bär S, Stoetzel C, Geoffroy V, Lannes B, Rinaldi B, Fischer F, Becker HD, Pelletier V, Pagan C, Acquaviva-Bourdain C, Kremer S, Mirande M, Tranchant C, Muller J, Friant S, Dollfus H (2019)
Mutations in KARS cause a severe neurological and neurosensory disease with optic neuropathy.

Hum Mutat. 2019;40:1826-1840. doi

Varré J.S., d'Agostino N., Touzet P., Gallina S., Tamburino R., Cantarella C., Ubrig E., Cardi T., Drouard L., Gualberto J.M. and Scotti N. (2019)
Complete sequence, multichromosomal architecture and transcriptome analysis of the Solanum tuberosum mitochondrial genome
International Journal of Molecular Sciences
, 20:4788 doi

Waltz F, Nguyen T-T, Arrivé M, Bochler A, Chicher J, Hammann P, Kuhn L, Quadrado M, Mireau H, Hashem Y, Giegé P (2019)
Small is big in Arabidopsis mitochondrial ribosome.
Nature Plants 5 (1):106-117. Abstract

2018

González-Serrano LE, Karim L, Pierre F, Schwenzer H, Rotig A, Munnich A, and Sissler M. (2018)
Three human aminoacyl-tRNA synthetases have distinct sub-mitochondrial localizations that are unaffected by disease-associated mutations.
J Biol Chem.  doi: 10.1074/jbc.RA118.003400 Abstract

Hosseini M, Roy P, Sissler M, Zirbel CL, Westhof E, Leontis N (2018)
How to fold and protect mitochondrial ribosomal RNA with fewer guanines
Nucleic Acids Research,  gky762, doi

Juhling T, Duchardt-Ferner E, Bonin S, Wohnert J, Putz J, Florentz C, Betat H, Sauter C, and Morl M (2018)
Small but large enough: structural properties of armless mitochondrial tRNAs from the nematode Romanomermis culicivorax.
Nucleic Acids Res. doi: 10.1093/nar/gky593. Abstract

Le Ret M, Belcher S, Graindorge S, Wallet C, Koechler S, Erhardt M, Williams-Carrier R, Barkan A, Gualberto JM (2018)
An organellar thymidine kinase is required for the efficient replication of the maize plastidial genome. Plant physiology.  Abstract

Loutre R, Heckel AM, Smirnova A, Entelis N, Tarassov I (2018)
Can Mitochondrial DNA be CRISPRized: Pro and Contra.

IUBMB Life. doi:10.1002/iub.1919. Abstract

Loutre R, Heckel AM, Jeandard D, Tarassov I, Entelis N (2018)
Anti-replicative recombinant 5S rRNA molecules can modulate the mtDNA heteroplasmy in a glucose-dependent manner.
PloS one 13 (6):e0199258. doi:10.1371/journal.pone.0199258  Abstract

Yakobov N, Debard S, Fischer F, Senger B, Becker HD (2018)
Cytosolic aminoacyl-tRNA synthetases: Unanticipated relocations for unexpected functions.

Biochim Biophys Acta Gene Regul Mech 1861 (4):387-400. doi:10.1016/j.bbagrm.2017.11.004
Abstract

2017

Baleva MV, Meyer M, Entelis N, Tarassov I, Kamenski P, Masquida B (2017)
Factors beyond Enolase 2 and Mitochondrial Lysyl-tRNA Synthetase Precursor Are Required for tRNA Import into Yeast Mitochondria.
Biochemistry Biokhimiia 82 (11):1324-1335. doi:10.1134/S0006297917110104 Abstract

Carapito C, Kuhn L, Karim L, Rompais M, Rabilloud T, Schwenzer H, Sissler M (2017)
Two proteomic methodologies for defining N-termini of mature human mitochondrial aminoacyl-tRNA synthetases.
Methods 113:111-119. doi:10.1016/j.ymeth.2016.10.012 Abstract

Chaliotis A, Vlastaridis P, Mossialos D, Ibba M, Becker HD, Stathopoulos C, Amoutzias GD (2017)
The complex evolutionary history of aminoacyl-tRNA synthetases.
Nucleic acids research 45 (3):1059-1068. doi:10.1093/nar/gkw1182 Abstract

Chicherin IV, Levitsky SA, Krasheninnikov IA, Tarassov I, Kamenski P (2017)
The prospects of gene therapy of for mitochondrial diseases: can’t we do without CRISPR/Cas9?
Bulletin of RSMU 3:43-47 Abstract

Cognat V, Morelle G, Megel C, Lalande S, Molinier J, Vincent T, Small I, Duchene AM, Marechal-Drouard L (2017)
The nuclear and organellar tRNA-derived RNA fragment population in Arabidopsis thaliana is highly dynamic.
Nucleic acids research 45 (6):3460-3472. doi:10.1093/nar/gkw1122 Abstract

Debard S, Bader G, De Craene JO, Enkler L, Bar S, Laporte D, Hammann P, Myslinski E, Senger B, Friant S, Becker HD (2017)
Nonconventional localizations of cytosolic aminoacyl-tRNA synthetases in yeast and human cells.
Methods 113:91-104. doi:10.1016/j.ymeth.2016.09.017 Abstract

Gualberto JM and Newton KJ (2017)
Plant mitochondrial genomes:dynamics and mechanisms of mutation
Annu Rev Plant Biol.  68:17.1–17.28 doi:10.1146/annurev-arplant-043015-112232 Abstract

Moulinier L, Ripp R, Castillo G, Poch O, Sissler M (2017)
MiSynPat: An integrated knowledge base linking clinical, genetic, and structural data for disease-causing mutations in human mitochondrial aminoacyl-tRNA synthetases.
Hum Mutat. doi:10.1002/humu.23277 Abstract

Namer LS, Osman F, Banai Y, Masquida B, Jung R, Kaempfer R (2017)
An Ancient Pseudoknot in TNF-alpha Pre-mRNA Activates PKR, Inducing eIF2alpha Phosphorylation that Potently Enhances Splicing.
Cell Rep 20 (1):188-200. doi:10.1016/j.celrep.2017.06.035  Abstract

Paszkiewicz G, Gualberto JM, Benamar A, Macherel D, Logan DC (2017)
Arabidopsis Seed Mitochondria Are Bioenergetically Active Immediately upon Imbibition and Specialize via Biogenesis in Preparation for Autotrophic Growth.
The Plant cell 29 (1):109-128. doi:10.1105/tpc.16.00700 Abstract

Pinker F, Schelcher C, Fernandez-Millan P, Gobert A, Birck C, Thureau A, Roblin P, Giegé P, Sauter C (2017)
Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding

J Biol Chem, 292:13904-13913 doi: 10.1074/jbc.M117.782078. Abstract

Salinas-Giegé T, Cavaiuolo M, Cognat V, Ubrig E, Remacle C, Duchêne AM, Vallon O, Maréchal-Drouard L.
Polycytidylation of mitochondrial mRNAs in Chlamydomonas reinhardtii.
Nucleic Acids Res.,45:12963–12973, doi:10.1093/nar/gkx903. Abstract

Sissler M, Gonzalez-Serrano LE, Westhof E (2017)
Recent Advances in Mitochondrial Aminoacyl-tRNA Synthetases and Disease.
Trends Mol Med 23 (8):693-708. doi:10.1016/j.molmed.2017.06.002 Abstract

Smirnov A, Schneider C, Hor J, Vogel J (2017)
Discovery of new RNA classes and global RNA-binding proteins.
Curr Opin Microbiol 39:152-160. doi:10.1016/j.mib.2017.11.016  abstract

Vincent T, Vingadassalon A, Ubrig E, Azeredo K, Srour O, Cognat V, Graindorge V, Salinas, T, Maréchal-Drouard L, Duchêne AM.
A genome-scale analysis of mRNAs targeting to plant mitochondria : upstream AUGs in 5’-UTRs reduce mitochondrial association.

Plant J, 92(6):1132-1142. doi: 10.1111/tpj.13749. Abstract

Yakobov N, Debard S, Fischer F, Senger B, Becker HD
Cytosolic aminoacyl-tRNA synthetases: unanticipated relocations for unexpected functions
.
Biochimica et biophysica acta. doi:10.1016/j.bbagrm.2017.11.004 Abstract

2016

Bonnard G, Gobert A, Arrivé M, Pinker F, Salinas-Giegé T and Giegé P (2016)
Transfer RNA maturation in Chlamydomonas mitochondria, chloroplast and the nucleus by a single RNase P protein.
Plant J. 87 (3):270-280. doi:10.1111/tpj.13198 Abstract

Carapito C, Kuhn L, Karim L, Rompais M, Rabilloud T, Schwenzer H, Sissler M (2016)
Two proteomic methodologies for defining N-termini of mature human mitochondrial aminoacyl-tRNA synthetases.
Methods. doi: 10.1016/j.ymeth.2016.10.012. [Epub ahead of print] Abstract

Cardi M, Zaffagnini M, De Lillo A, Castiglia G, Chibani K, Gualberto JM, Rouhier N, Jacquot JP, Esposito S (2016)
Plastidic P2 glucose-6P dehydrogenase from poplar is modulated by thioredoxin m-type: Distinct roles of cysteine residues in redox regulation and NADPH inhibition.
Plant Sci 252:257-266.

Cognat V, Morelle G, Megel C, Lalande S, Molinier J, Vincent T, Small I, Duchene AM, Maréchal-Drouard L (2016)
The nuclear and organellar tRNA-derived RNA fragment population in Arabidopsis thaliana is highly dynamic.
Nucleic acids research. doi:10.1093/nar/gkw1122 Abstract

Dovydenko I, Tarassov I, Venyaminova A, Entelis N (2016)
Method of carrier-free delivery of therapeutic RNA importable into human mitochondria: Lipophilic conjugates with cleavable bonds.
Biomaterials 76:408-417. Abstract

Fernandez-Millan P, Schelcher C, Chihade J, Masquida B, Giegé P, Sauter C (2016)
Transfer RNA: From pioneering crystallographic studies to contemporary tRNA biology.
Arch Biochem Biophys. doi:10.1016/j.abb.2016.03.005 Abstract

Fujii S, Suzuki T, Giegé P, Higashiyama T, Koizuka N, Shikanai T (2016)
The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis.
The Plant J. 86 (6):504-513. doi:10.1111/tpj.13185 Abstract

Ibrahim M, Gahoual R, Enkler L, Becker H, Chicher J, Hammann P, Francois YN, Kuhn L, Leize-Wagner E
Improvement of mitochondria extract from Saccharomyces cerevisiae characterization in shotgun proteomics using sheathless capillary electrophoresis coupled to tandem mass spectrometry.
Journal of chromatographic science. doi:10.1093/chromsci/bmw005. Abstract

Lallement PA, Roret T, Tsan P, Gualberto JM, Girardet JM, Didierjean C, Rouhier N, Hecker A (2016)
Insights into ascorbate regeneration in plants: investigating the redox and structural properties of dehydroascorbate reductases from Populus trichocarpa.
The Biochemical journal 473 (6):717-731.  Abstract

Murcha MW, Kubiszewski-Jakubiak S, Teixeira PF, Gugel IL, Kmiec B, Narsai R, Ivanova A, Megel C, Schock A, Kraus S, Berkowitz O, Glaser E, Philippar K, Marechal-Drouard L, Soll J, Whelan J (2016) Plant-specific preprotein and amino acid transporter proteins are required for tRNA import into mitochondria.
Plant physiology 172 (4):2471-2490. doi:10.1104/pp.16.01519 Abstract

Schelcher C, Sauter C, Giegé P (2016)
Mechanistic and structural studies of Protein-Only RNase P compared to ribonucleoproteins reveal the two faces of the same enzymatic activity.
Biomolecules 6 (3). doi:10.3390/biom6030030 Abstract

Smirnova EV, Chicherin IV, Baleva MV, Entelis NS, Tarassov IA, Kamenski PA (2016)
Procedure for Purification of Recombinant preMsk1p from E. coli Determines Its Properties as a Factor of tRNA Import into Yeast Mitochondria.
Biochemistry Biokhimiia 81 (10):1081-1088. doi:10.1134/S0006297916100060 Abstract

Xiu Z, Sun F, Shen Y, Zhang X, Jiang R, Bonnard G, Zhang J, Tan BC (2016)
EMPTY PERICARP16 is required for mitochondrial nad2 Intron 4 cis-splicing, complex I assembly and seed development in maize.
Plant J. 85 (4):507-519. doi:10.1111/tpj.13122 Abstract

2015

Apostolidi M, Saad NY, Drainas D, Pournaras S, Becker HD, Stathopoulos C (2015)
A glyS T-box riboswitch with species-specific structural features responding to both proteinogenic and nonproteinogenic tRNAGly isoacceptors.
RNA 21 (10):1790-1806. Abstract

Baleva M, Gowher A, Kamenski P, Tarassov I, Entelis N, Masquida B (2015)
A Moonlighting Human Protein Is Involved in Mitochondrial Import of tRNA.
International journal of molecular sciences 16 (5):9354-9367. Abstract

Dietrich A, Wallet C, Iqbal RK, Gualberto JM, Lotfi F (2015)
Organellar non-coding RNAs: Emerging regulation mechanisms.
Biochimie 117, 48-62. Abstract

Doublet V, Ubrig E, Alioua A, Bouchon D, Marcade I, Marechal-Drouard L (2015)
Large gene overlaps and tRNA processing in the compact mitochondrial genome of the crustacean Armadillidium vulgare.
RNA biology 12 (10):1159-1168. Abstract

Dovydenko I, Heckel AM, Tonin Y, Gowher A, Venyaminova A, Tarassov I, Entelis N (2015)
Mitochondrial targeting of recombinant RNA.
Methods in molecular biology 1265: 209-225 . Abstract

Gualberto JM, Le Ret M, Beator B, Kuhn K (2015)
The RAD52-like protein ODB1 is required for the efficient excision of two mitochondrial introns spliced via first-step hydrolysis.
Nucleic acids research 43 (13):6500-6510. Abstract

Kubiszewski-Jakubiak S, Megel C, Ubrig E, Salinas T, Duchene A-M, Marechal-Drouard L (2015)
In vitro RNA uptake studies in plant mitochondria.
Methods in molecular biology (Clifton, N J ) 1305:45-6. Abstract

Lallement PA, Meux E, Gualberto JM, Dumarcay S, Favier F, Didierjean C, Saul F, Haouz A, Morel-Rouhier M, Gelhaye E, Rouhier N, Hecker A (2015)
Glutathionyl-hydroquinone reductases from poplar are plastidial proteins that deglutathionylate both reduced and oxidized glutathionylated quinones.
FEBS letters 589: 37-44. Abstract

Lechner M, Rossmanith W, Hartmann RK, Tholken C, Gutmann B, Giege P, Gobert A (2015)
Distribution of Ribonucleoprotein and Protein-Only RNase P in Eukarya.
Molecular biology and evolution 32 (12):3186-3193. Abstract

Megel C, Morelle G, Lalande S, Duchene AM, Small I, Marechal-Drouard L (2015)
Surveillance and Cleavage of Eukaryotic tRNAs.
Int. J. Mol. Sci. 16: 1873-1893. Abstract

Mileshina D, Niazi AK, Weber-Lotfi F, Gualberto J, Dietrich A (2015)
Mitochondrial Genetic Manipulation.
In:Somatic Genome Manipulation: Advances, Methods and Applications (Li XQ, Donnelly D, Jensen TG, eds) Chapter 13, pp. 275-321.Springer-Verlag, Berlin, Heidelberg, Germany.

Mileshina D, Niazi AK, Wyszko E, Szymanski M, Val R, Valentin C, Barciszewski J, Dietrich A (2015)
Mitochondrial targeting of catalytic RNAs.
Methods Mol. Biol. 1265, 227-254.

Pinker F, Giegé P, Sauter C (2015)
Crystallization and crystallographic analysis of an Arabidopsis nuclear proteinaceous RNase P
Acta Cristallogr F Struct Mol Commun. 71 : 1372-1377.  Abstract

Salinas-Giegé T, Giegé R, Giegé P (2015)
tRNA biology in mitochondria.
Int. J. Mol. Sci. 16: 4518-4559. Abstract

Sauter C, Lorber B, Gaudry A, Karim L, Schwenzer H, Wien F, Roblin P, Florentz C and Sissler M (2015).
Neurodegenerative disease-associated mutants of a human mitochondrial aminoacyl-tRNA synthetase present individual molecular signatures.
Scientific Reports, 5:17332. Abstract

Scotti N, Sannino L, Idoine A, Hamman P, De Stradis A, Giorio P, Marechal-Drouard L, Bock R, Cardi T (2015) The HIV-1 Pr55 gag polyprotein binds to plastidial membranes and leads to severe impairment of chloroplast biogenesis and seedling lethality in transplastomic tobacco plants.
Transgenic research 24 (2):319-33. Abstract

Simon M, Richard EM, Wang X, Shahzad M, Huang VH, Qaiser TA, Potluri P, Mahl SE, Davila A, Nazli S, Hancock S, Yu M, Gargus J, Chang R, Al-sheqaih N, Newman WG, Abdenur J, Starr A, Hegde R, Dorn T, Busch A, Park E, Wu J, Schwenzer H, Flierl A, Florentz C, Sissler M, Khan SN, Li R, Guan M-X, Friedman TB, Wu DK, Procaccio V, Riazuddin S, Wallace DC, Ahmed ZM, Huang T, Riazuddin S (2015)
Mutations of human NARS2, encoding the mitochondrial asparaginyl-tRNA synthetase, cause nonsyndromic deafness and Leigh Syndrome.
Plos Genetics 11(3):e1005097. Abstract

Sun F, Wang X, Bonnard G, Shen Y, Xiu Z, Li X, Gao D, Zhang Z, Tan BC (2015)
Empty pericarp7 encodes a mitochondrial E-subgroup pentatricopeptide repeat protein that is required for ccmF editing, mitochondrial function and seed development in maize.
The Plant journal 84 (2):283-295. Abstract

Wallet C, Le Ret M, Bergdoll M, Bichara M, Dietrich A, Gualberto JM (2015)
The RECG1 DNA translocase is a key factor in recombination surveillance, repair and segregation of the mitochondrial DNA in Arabidopsis.  
Plant Cell 27, 2907-2925. Abstract

Weber-Lotfi F, Koulintchenko MV, Ibrahim N, Hammann P, Mileshina DV, Konstantinov YM, Dietrich A (2015)
Nucleic acid import into mitochondria: New insights into the translocation pathways.
Biochim. Biophys. Acta 1853, 3165-3181. Abstract

2014

Araiso Y., Huot J.L., Skiguchi T., Frechin M., Fischer F., Enkler L., Senger B., Ishitani R.,  Becker, H.D., NurekiO. (2014).
Crystal structure of Saccharomyces cerevisiae mitochondrial GatFAB reveals a novel subunit assembly in tRNA-dependent amidotransferases.
Nucleic Acids Res.
 42, 6052-6063. Abstract

Atkinson GC, Kuzmenko A, Chicherin I, Soosaar A, Tenson T, Carr M, Kamenski P, Hauryliuk V (2014)
An evolutionary ratchet leading to loss of elongation factors in eukaryotes.
BMC evolutionary biology 14: 35

Couturier J., Wu H.C., Dhalleine T., Pégeot H., Sudre D., Gualberto J.M., Jacquot J.P., Gaymard F., Vignols F. and Rouhier N. (2014).
Monothiol glutaredoxin-BolA interactions: redox control of Arabidopsis thaliana BolA2 and SufE1. 
Mol. Plant 7, 187-205. Abstract

Frechin M, Enkler L, Tetaud E, Laporte D, Senger B, Blancard C, Hammann P, Bader G, Clauder-Munster S, Steinmetz LM, Martin RP, di Rago J, Becker HD (2014)
Expression of Nuclear and Mitochondrial Genes Encoding ATP Synthase Is Synchronized by Disassembly of a Multisynthetase Complex.
Molecular cell 56: 763-776

Gonzalez, D.H. and Giegé P. (2014)
Biogenesis of the oxidative phosphorylation machinery in plants. From gene expression to complex assembly. 
Frontiers in Plant Physiol. 5, 225. Abstract

Gualberto J.M. and Kühn K. (2014).
DNA-binding proteins in plant mitochondria: Implications for transcription.
Mitochondrion, doi:10.1016/j.mito.2014.02.004. Abstract

Gualberto J.M., Mileshina D., Wallet C., Niazi A.K., Weber-Lotfi F. and Dietrich A. (2014).
The plant mitochondrial genome: dynamics and maintenance. 
Biochimie 100: 107-120. Abstract

Hammani K, Barkan A (2014)
An mTERF domain protein functions in group II intron splicing in maize chloroplasts.
Nucleic acids research 42: 5033-5042

Hammani K, Bonnard G, Bouchoucha A, Gobert A, Pinker F, Salinas T, Giegé P (2014)
Helical repeats modular proteins are major players for organelle gene expression.
Biochimie 100: 141-150

Hammani K., Giegé P. (2014).
RNA metabolism in plant mitochondria.
Trends Plant Sci. 19, 380-389. Abstract

Huot J.L., Enkler L., Megel C., Karim L., Laporte D., Becker H., Duchêne A.M., Sissler M. and Maréchal-Drouard L. (2014).
Idiosyncrasies in decoding mitochondrial genomes.
Biochimie 100, 95-106. Abstract

Kondo J., Sauter C. and Masquida B. (2014).
RNA Crystallization.
In Handbook of RNA biochemistry: Second, Completely Revised and Enlarged Edition (Hartmann, R.K., Bindereif, A., Schön, A., Westhof, E., eds.) pp. 481-498.
Wiley-VCH. Abstract

Koulintchenko M.V., Ibrahim N., Klimenko E.S., Konstantinov Yu.M., Weber-Lotfi F. and Dietrich A. (2014).
Specificity of DNA import into isolated mitochondria from plants and mammals.
Biopolym. Cell 30: 68-70.

Kuzmenko A, Atkinson GC, Levitskii S, Zenkin N, Tenson T, Hauryliuk V, Kamenski P (2014)
Mitochondrial translation initiation machinery: conservation and diversification.
Biochimie 100: 132-140

Lallement P.A., Meux E., Gualberto J.M., Prosper P., Didierjean C., Saul F., Haouz A., Rouhier N., Hecker A. (2014).
Structural and enzymatic insights into Lambda glutathione transferases from Populus trichocarpa, monomeric enzymes constituting an early divergent class specific to terrestrial plants.
Biochem J., doi:10.1042/BJ20140390. Abstract

Laporte D, Huot JL, Bader G, Enkler L, Senger B, Becker HD (2014)
Exploring the evolutionary diversity and assembly modes of multi-aminoacyl-tRNA synthetase complexes: Lessons from unicellular organisms.
FEBS letters 588: 4268-4278

Maréchal-Drouard L., Sissler M. and Tarassov I., Eds. (2014).
Mitochondria: An organelle for life.
Biochimie. Elsevier. Abstract

Meyer M, Masquida B (2014)
cis-Acting 5' hammerhead ribozyme optimization for in vitro transcription of highly structured RNAs.
Methods in molecular biology 1086: 21-40 Abstract

Meyer M., Nielsen H., Oliéric V., Roblin P., Johansen S.D., Westhof E., Masquida B. (2014).
Speciation of a group I intron into a lariat capping ribozyme
.
Proc. Natl. Acad. Sci. USA 111, 7659-64. Abstract

Michaud M., Ubrig E., Filleur S., Erhardt M., Ephritikhine G., Marechal-Drouard L. and Duchene A. M. (2014).
Differential targeting of VDAC3 mRNA isoforms influences mitochondria morphology.
Proc Natl Acad Sci U.S.A., 111:8991-6. Abstract
Press Release @ INSB website

Michaud M., Maréchal-Drouard L. and Duchêne A.M. (2014).
Targeting of cytosolic mRNA to mitochondria : naked RNA can bind to the mitochondrial surface.
Biochimie, 100:159-166, 2014. Abstract

Patrushev MV, Kamenski PA, Mazunin IO (2014)
Mutations in mitochondrial DNA and approaches for their correction.
Biochemistry. Biokhimiia 79: 1151-1160

Salinas T, El Farouk-Ameqrane S, Ubrig E, Sauter C, Duchene AM, Marechal-Drouard L (2014)
Molecular basis for the differential interaction of plant mitochondrial VDAC proteins with tRNAs.
Nucleic acids research 42: 9937-9948 Abstract

Salinas T., Larosa V., Cardol P., Maréchal-Drouard L. and Remacle C. (2014).
Respiratory-deficient mutants of the unicellular green alga Chlamydomonas : A review.
Biochimie, 100:207-218, 2014. Abstract

Schwenzer H, Scheper GC, Zorn N, Moulinier L, Gaudry A, Leize E, Martin F, Florentz C, Poch O, Sissler M (2014)
Released selective pressure on a structural domain gives new insights on the functional relaxation of mitochondrial aspartyl-tRNA synthetase.
Biochimie 100: 18-26 Abstract

Schwenzer H, Zoll J, Florentz C, Sissler M (2014)
Pathogenic implications of human mitochondrial aminoacyl-tRNA synthetases.
In: Kim S (ed) Topics in Current Chemistry-Aminoacyl-tRNA Synthetases: Applications in Chemistry, Biology and Medicine. Springer, pp 247-292

Scotti N, Sannino L, Idoine A, Hamman P, De Stradis A, Giorio P, Marechal-Drouard L, Bock R, Cardi T (2014) The HIV-1 Pr55 polyprotein binds to plastidial membranes and leads to severe impairment of chloroplast biogenesis and seedling lethality in transplastomic tobacco plants. Transgenic research

Tang Y, Nielsen H, Masquida B, Gardner PP, Johansen SD (2014)
Molecular characterization of a new member of the lariat capping twin-ribozyme introns.
Mobile DNA 5: 25

Tonin Y, Entelis N (2014)
Maladies Mitochondriales et Stratégies Thérapeutiques
.
Sci. Med., 30 (12) :1101-9

Tonin Y., Heckel A.-M., Vysokikh M., Dovydenko I., Meschaninova M.,  Rötig A., Munnich A. , Venyaminova A., Tarassov I., Entelis N. (2014).
Modelling of antigenomic therapy of mitochondrial diseases by mitochondrially addressed RNA targeting a pathogenic point mutation in mtDNA.
J. Biol. Chem. 289, 13323-34. Abstract

Tonin Y., Heckel A.-M., Dovydenko I., Meschaninova M., Comte C., Venyaminova A., Pyshnyi D., Tarassov I., Entelis N. (2014).
Characterization of chemically modified oligonucleotides targeting a pathogenic mutation in human mitochondrial DNA.

Biochimie 100, 192-9. Abstract

Weber-Lotfi F., Mileshina D.V., Ibrahim N., Koulintchenko M.V., D'Souza G.G.M., Saxena V., Konstantinov Yu.M., Lightowlers R.N. and Dietrich A. (2014)
DNA import competence and mitochondrial genetics.
Biopolym. Cell 30: 71-73.

Wende S., Platzer E.G., Jühling F., Pütz J., Florentz C., Stadler P.F. and Mörl M. (2014).
Biological evidence for the world's smallest tRNAs.

Biochimie 100, 151-158. Abstract

Wolff P, Amal I, Olieric V, Chaloin O, Gygli G, Ennifar E, Lorber B, Guichard G, Wagner J, Dejaegere A, Burnouf D (2014)
Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J. Med. Chem. 57: 7565-7576

2013

Bannwarth S., Procaccio V., Lebre A.S., Jardel C., Chaussenot A., Hoarau C., Maoulida H., Charrier N., Gai X., Xie H.M., Ferre M., Fragaki K., Hardy G., Mousson de Camaret B., Marlin S., Dhaenens C.M., Slama A., Rocher C., Paul Bonnefont J.,Rötig A., Aoutil N., Gilleron M., Desquiret-Dumas V., Reynier P., Ceresuela J., Jonard L., Devos A., Espil-Taris C., Martinez D., Gaignard P., Le Quan Sang K.H., Amati-Bonneau P., Falk M.J., Florentz C., Chabrol B., Durand-Zaleski I., Paquis-Flucklinger V. (2013).
Prevalence of rare mitochondrial DNA mutations in mitochondrial disorders.
J Med Genet, in press. Abstract

Bernt M., Donath A., Juhling F., Externbrink F., Florentz C., Fritzsch G., Putz J., Middendorf M. and Stadler P.F. (2013).
MITOS: Improved de novo metazoan mitochondrial genome annotation.
Mol Phylogenet Evol, 69(2), 313-9. Abstract

Cognat V., Pawlak G., Duchêne A.M., Daujat M., Gigant A., Salinas T., Michaud M., Gutmann B., Giegé P., Gobert A. and Marechal-Drouard L.
Plant RNA a database for tRNAs of photosynthetic eukaryotes.
Nucleic Acids Res., 41:273-279, 2013. Abstract

Comte C, Tonin Y, Heckel-Mager AM, Boucheham A, Smirnov A, Aure K, Lombes A, Martin RP, Entelis N, Tarassov I (2013)
Mitochondrial targeting of recombinant RNAs modulates the level of a heteroplasmic mutation in human mitochondrial DNA associated with Kearns Sayre Syndrome.
Nucleic acids research 41: 418-433

Cumbo A., Lorber B., Corvini P.F., Meier W. and Shahgaldian P. (2013).
A synthetic nanomaterial for virus recognition produced by surface imprinting.

Nat Commun 4, 1503. Abstract

Florentz C, Pütz J, Jühling F, Schwenzer H, Stadler P, Lorber B, Sauter C, Sissler M (2013)
Translation in mammalian mitochondria (part B): Order and disorder linked to tRNAs and aminoacyl-tRNA synthetases.
In: Duchêne A-M (ed) Translation in mitochondria and other organelles. Springer

Giegé P.
Pentatricopeptide repeat proteins: a set of modular RNA specific binders massively used for organelle gene expression.
RNA Biol., 14(9):1417-1418, 2013.  Abstract

Gobert A, Pinker F, Fuchsbauer O, Gutmann B, Boutin R, Roblin P, Sauter C, Giegé P. (2013).
Structural insights into protein-only RNase P complexed with tRNA.

Nat Commun 4, 1353. Full text

Gowher A, Smirnov A, Tarassov I, Entelis N (2013)
Induced tRNA import into human mitochondria: implication of a host aminoacyl-tRNA-synthetase.
PloS one 8: e66228

Michely S., Toulza E., Subirana L., Uwe J., Cognat V., Maréchal-Drouard L., Grimsley N., Moreua H. and Piganeau G. (2013)
Evolution of Codon Usage In The Smallest Photosynthetic Eukaryotes And Their Giant Viruses.
Genome Biol Evol, 5(5):848-859. Abstract

Neuenfeldt A., Lorber B., Ennifar E., Gaudry A., Sauter C., Sissler M. and Florentz C. (2013).
Thermodynamic properties distinguish human mitochondrial aspartyl-tRNA synthetase from bacterial homolog with same 3D architecture.

Nucleic Acids Res 41(4), 2698-708. Abstract

Niazi AK, Mileshina D, Cosset A, Val R, Weber-Lotfi F, Dietrich A (2013) Targeting nucleic acids into mitochondria: Progress and prospects. Mitochondrion 13: 548–558 Abstract

Nozawa K., Ishitani R., Yoshihisa T., Sato M., Arisaka F., Kanamal S., Dohmae N., Mangroo D., Senger B., Becker H.D., Nureki, O. (2013).
Crystal structure of Cex1p reveals the mechanism of tRNA trafficking between nucleus and cytoplasm.
Nucleic Acids Res. 41, 3901-3914. Abstract

Pinker F, Bonnard G, Gobert A, Gutmann B, Hammani K, Sauter C, Gegenheimer PA, Giegé P (2013)
PPR proteins shed a new light on RNase P biology.
RNA biology 10: 1457-1468 Abstract

Pinker F, Brun M, Morin P, Deman AL, Chateaux JF, Oliéric V, Stirnimann C, Lorber B, Terrier N, Ferrigno R, Sauter C (2013)
ChipX: a novel microfluidic chip for counter-diffusion crystallization of biomolecules and in situ crystal analysis at room temperature.
Crystal Growth & Design 13: 3333–3340

Saad Y.N., Stamatopoulou V., Brayé M., Drainas D., Stathopoulos C., Becker H.D. (2013).
Two-codon T-Box riboswitch binding two tRNAs.
Proc. Natl. Acad. Sci. U. S. A. 110, 12756-12761. Abstract

Salinas T., Remacle C. and Maréchal-Drouard L.. (2013)
Mitochondrial translation in green algae and higher plants
.
volume Springer, Heidelberg New York Dordrecht London.

Sissler M, Schwenzer H, Scheper G, Zorn N, Moulinier L, Gaudry A, Leize E, Martin F, Florentz C, Poch O (2013)
Evolutionary decline for a nuclear-encoded human mitochondrial aminoacyl-tRNA synthetase.
FEBS Journal 280: 543-544

Tarassov I, Chicherin I, Tonin Y, Smirnov A, Kamenski P, Entelis N (2013)
Mitochondrial targeting of RNA and mitochondrial translation.
In: Duchene A-M (ed) Translation in mitochondria and other organelles. Springer-Verlag Berlin Heidelberg, pp 85-107

van Berge L., Kevenaar J., Polder E., Gaudry A., Florentz C., Sissler M., van der Knaap M.S. and Scheper G.C. (2013).
Pathogenic mutations causing LBSL affect mitochondrial aspartyl-tRNA synthetase in diverse ways.

Biochem J 450(2), 345-50. Abstract

Zhang H., Endrizzi J.A., Shu Y., Haque F., Sauter C., Shlyakhtenko L.S., Lyubchenko Y., Guo P. and Chi Y.I. (2013).
Crystal structure of 3WJ core revealing divalent ion-promoted thermostability and assembly of the Phi29 hexameric motor pRNA.
RNA 19(9), 1226-37. Abstract

2012

Atkinson GC, Kuzmenko A, Kamenski P, Vysokikh MY, Lakunina V, Tankov S, Smirnova E, Soosaar A, Tenson T, Hauryliuk V. (2012)
Evolutionary and genetic analyses of mitochondrial translation initiation factors identify the missing mitochondrial IF3 in S. cerevisiae
.
Nucleic Acids Res. 40 (13), 6122-6134. Abstract

Belostotsky R, Frishberg Y, Entelis N (2012)
Human mitochondrial tRNA quality control in health and disease: a channelling mechanism?
RNA biology 9: 33-39 Abstract

Chibani K, Tarrago L, Gualberto JM, Wingsle G, Rey P, Jacquot JP, Rouhier N (2012)
Atypical thioredoxins in poplar: the glutathione-dependent thioredoxin-like 2.1 supports the activity of target enzymes possessing a single redox active cysteine.
Plant physiology 159: 592-605

Dietrich A, Mileshina D, Niazi AK, Cosset A, Val R, Ibrahim N, Weber-Lotfi F (2012)
Manipulating the mitochondrial genetic system
In: Poindron P, Piguet P (eds) Genetically Modified Organisms and Genetic Engineering in Research and Therapy, BioValley Monographs Karger Medical and Scientific, Basel, Switzerland, pp 103-119

Dietrich A, Rolle K, Gabryelska M, Wyszko E, Val R, Szymanski M, Valentin C, Cosset A, Barciszewski J (2012)
RNA technologies for mitochondrial genetics.
In: Erdmann VA, Barciszewski J (eds) RNA Technologies - From Nucleic Acids Sequences to Molecular Medicine. Springer-Verlag, Berlin, Heidelberg, Germany, pp 313-356

Duchene AM, Giegé P (2012)
Dual localized mitochondrial and nuclear proteins as gene expression regulators in plants?
Frontiers in plant science 3: 221 Abstract

Fischer F., Huot J.L., Lorber B., Diss G., Hendrickson T.L., Becker H.D., Lapointe, J., Kern, D. (2012).
The asparagine-transamidosome from Helicobacter pylori: a dual-kinetic mode in non-discriminating aspartyl-tRNA synthetase safeguards the genetic code.
Nucleic Acids Res. 40, 4965-4976. Abstract

Gaudry A, Lorber B, Messmer M, Neuenfeldt A, Sauter C, Florentz C, Sissler M (2012) Redesigned N-terminus enhances expression, solubility, and crystallisability of mitochondrial enzyme. Protein Engineering, Design and Selection 25: 473-481 Abstract

Giege R., Jühling F., Pütz J., Stadler P., Sauter C. and Florentz C. (2012).
Structure of transfer RNAs: similarity and variability.
Wiley Interdiscip Rev RNA 3(1), 37-61. Abstract

Gutmann B., Gobert A. and Giegé P. (2012).
PRORP proteins support RNase P activity in both organelles and the nucleus in Arabidopsis.

Genes & Dev., 26: 1022-1027. Abstract

Gutmann B, Gobert A, Giegé P (2012)
Mitochondrial genome evolution and the emergence of PPR proteins.
Advances in botanical research. Vol. Mitochondrial genome evolution (Elsevier). Mitochondrial genome evolution. Ed. by L. Drouard. : 253-313

Janicka S, Kuhn K, Le Ret M, Bonnard G, Imbault P, Augustyniak H, Gualberto JM (2012)
A RAD52-like single-stranded DNA binding protein affects mitochondrial DNA repair by recombination.
The Plant journal : for cell and molecular biology 72: 423-435

Jühling F., Pütz J., Florentz C. and Stadler P.F. (2012).
Armless mitochondrial tRNAs in enoplea (nematoda).

RNA Biol 9(9), 1161 - 1166. Abstract

Jühling F., Pütz J., Bernt M., Donath A., Middendorf M., Florentz C. and Stadler P.F. (2012).
Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements.
Nucleic Acids Res 40(7), 2833-2845. Abstract

Kanga S, Bernard D, Mager-Heckel AM, Erpapazoglou Z, Mattiroli F, Sixma TK, Leon S, Urban-Grimal D, Tarassov I, Haguenauer-Tsapis R (2012)
A deubiquitylating complex required for neosynthesis of a yeast mitochondrial ATP synthase subunit.
PloS one 7: e38071 Abstract

Koulintchenko MV, Dietrich A, Konstantinov YM (2012)
Mitochondrial genetic transformation via biotechnological approaches or natural competence mechanism: do we have a choice?
Biopolym. Cell 28: 261–266

Lorber B., Fischer F., Bailly M., Roy H. and Kern D. (2012).
Protein Analysis by Dynamic Light Scattering: Methods and Techniques for Graduate Students.
Biochemistry and Molecular Biology Education, in press.

Maréchal-Drouard L (ed.)(2012).
Mitochondrial Genome Evolution. Series editors, J.P. Jacquot, P. Gadal,Elsevier, Amsterdam.

Michaud M, Duchêne AM (2012).
Macromolecules trafficking to plant mitochondria.
In Mitochondrial Genome Evolution. Advances in Botanical Research. L. Maréchal-Drouard (ed.) Elsevier, Amsterdam. Vol 63, pp 316-347.

Remacle C., Hamel P., Larosa V., Salinas T., Subramanian N., Bonnefoy N., Kempken F. (2012).
Transformation and nucleic acid delivery to mitochondria. In Genomics of chloroplasts and mitochondria. R. Bock (ed) Vol 35: 443-458.

Robert N., d'Erfuth I., Marmagne A., Erhardt M., Allot M., Gissot L., Monachello D., Michaud M., Duchêne A.M.,Barbier-Brygoo H., Maréchal-Drouard L., Ephritikhine G. and Filleur S. (2012).
Voltage dependent anion channels (VDACs) in Arabidopsis have a dual localization in the cell but show a disctrinct role in mitochondria. 
Plant Mol. Biol., 78: 431-446. Abstract

Saad N.Y., Schiel B., Brayé M., Heap J.T., Minton N.P., Dürre P.,  Becker, H. D. (2012)
Riboswitch (T-box)-mediated Control of tRNA-dependent Amidation in Clostridium acetobutylicum Rationalizes Gene and Pathway Redundancy for Asparagine and Asparaginyl-tRNAAsn Synthesis.
J. Biol. Chem. 287, 20382-20394. Abstract

Salinas T, Duby F, Larosa V, Coosemans N, Bonnefoy N, Motte P, Maréchal-Drouard L and Remacle C (2012).
Co-evolution of mitochondrial tRNA import and codon usage determines translational efficiency in the green alga Chlamyodomonas reinhardtii.
Plos Genet, 8(9):e1002946. Abstract

Sánchez-Puig N., Sauter C., Lorber B., Giegé R. and Moreno A. (2012).
Predicting Protein Crystallizability and Nucleation.
Protein Pept Lett 19(7), 725-731. Abstract

Sauter C., Lorber B., McPherson A. and Giegé R. (2012).
Part 4. Crystallization. Chapter 4.1. General methods.
In International Tables for Crystallography (Arnold, E., Himmel, D.M., Rossmann, M., eds.) Vol. F: Crystallography of biological macromolecules, 2nd ed., pp. 99-121. Wiley, Chichester. Full text

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Apr 24 2024

The MitoCross research cluster wishes to welcome one junior chair in Strasbourg. The chair will be...

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