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Determination of protein-only RNase P interactome in Arabidopsis mitochondria and chloroplasts identifies a complex between PRORP1 and another NYN domain nuclease
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When a common biological role does not imply common disease outcomes: Disparate pathology linked to human mitochondrial aminoacyl-tRNA synthetases
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Jeandard D, Smirnova A, Tarassov I, Barrey E, Smirnov A, Entelis N
Import of non-coding RNAs into human mitochondria: a critical review and emerging approaches.
Cells 8, 286; doi:10.3390/cells8030286 Abstract
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Role of pyrimidine salvage pathway in the maintenance of the organellar and nuclear genome integrity
Plant Journal, 97(3):430-446 Abstract
Scheidecker S, Bär S, Stoetzel C, Geoffroy V, Lannes B, Rinaldi B, Fischer F, Becker HD, Pelletier V, Pagan C, Acquaviva-Bourdain C, Kremer S, Mirande M, Tranchant C, Muller J, Friant S, Dollfus H (2019)
Mutations in KARS cause a severe neurological and neurosensory disease with optic neuropathy.
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Complete sequence, multichromosomal architecture and transcriptome analysis of the Solanum tuberosum mitochondrial genome
International Journal of Molecular Sciences, 20:4788 doi
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Nature Plants 5 (1):106-117. Abstract
González-Serrano LE, Karim L, Pierre F, Schwenzer H, Rotig A, Munnich A, and Sissler M. (2018)
Three human aminoacyl-tRNA synthetases have distinct sub-mitochondrial localizations that are unaffected by disease-associated mutations.
J Biol Chem. doi: 10.1074/jbc.RA118.003400 Abstract
Hosseini M, Roy P, Sissler M, Zirbel CL, Westhof E, Leontis N (2018)
How to fold and protect mitochondrial ribosomal RNA with fewer guanines
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Juhling T, Duchardt-Ferner E, Bonin S, Wohnert J, Putz J, Florentz C, Betat H, Sauter C, and Morl M (2018)
Small but large enough: structural properties of armless mitochondrial tRNAs from the nematode Romanomermis culicivorax.
Nucleic Acids Res. doi: 10.1093/nar/gky593. Abstract
Le Ret M, Belcher S, Graindorge S, Wallet C, Koechler S, Erhardt M, Williams-Carrier R, Barkan A, Gualberto JM (2018)
An organellar thymidine kinase is required for the efficient replication of the maize plastidial genome. Plant physiology. Abstract
Loutre R, Heckel AM, Smirnova A, Entelis N, Tarassov I (2018)
Can Mitochondrial DNA be CRISPRized: Pro and Contra.
IUBMB Life. doi:10.1002/iub.1919. Abstract
Loutre R, Heckel AM, Jeandard D, Tarassov I, Entelis N (2018)
Anti-replicative recombinant 5S rRNA molecules can modulate the mtDNA heteroplasmy in a glucose-dependent manner.
PloS one 13 (6):e0199258. doi:10.1371/journal.pone.0199258 Abstract
Yakobov N, Debard S, Fischer F, Senger B, Becker HD (2018)
Cytosolic aminoacyl-tRNA synthetases: Unanticipated relocations for unexpected functions.
Biochim Biophys Acta Gene Regul Mech 1861 (4):387-400. doi:10.1016/j.bbagrm.2017.11.004
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Baleva MV, Meyer M, Entelis N, Tarassov I, Kamenski P, Masquida B (2017)
Factors beyond Enolase 2 and Mitochondrial Lysyl-tRNA Synthetase Precursor Are Required for tRNA Import into Yeast Mitochondria.
Biochemistry Biokhimiia 82 (11):1324-1335. doi:10.1134/S0006297917110104 Abstract
Carapito C, Kuhn L, Karim L, Rompais M, Rabilloud T, Schwenzer H, Sissler M (2017)
Two proteomic methodologies for defining N-termini of mature human mitochondrial aminoacyl-tRNA synthetases.
Methods 113:111-119. doi:10.1016/j.ymeth.2016.10.012 Abstract
Chaliotis A, Vlastaridis P, Mossialos D, Ibba M, Becker HD, Stathopoulos C, Amoutzias GD (2017)
The complex evolutionary history of aminoacyl-tRNA synthetases.
Nucleic acids research 45 (3):1059-1068. doi:10.1093/nar/gkw1182 Abstract
Chicherin IV, Levitsky SA, Krasheninnikov IA, Tarassov I, Kamenski P (2017)
The prospects of gene therapy of for mitochondrial diseases: can’t we do without CRISPR/Cas9?
Bulletin of RSMU 3:43-47 Abstract
Cognat V, Morelle G, Megel C, Lalande S, Molinier J, Vincent T, Small I, Duchene AM, Marechal-Drouard L (2017)
The nuclear and organellar tRNA-derived RNA fragment population in Arabidopsis thaliana is highly dynamic.
Nucleic acids research 45 (6):3460-3472. doi:10.1093/nar/gkw1122 Abstract
Debard S, Bader G, De Craene JO, Enkler L, Bar S, Laporte D, Hammann P, Myslinski E, Senger B, Friant S, Becker HD (2017)
Nonconventional localizations of cytosolic aminoacyl-tRNA synthetases in yeast and human cells.
Methods 113:91-104. doi:10.1016/j.ymeth.2016.09.017 Abstract
Gualberto JM and Newton KJ (2017)
Plant mitochondrial genomes:dynamics and mechanisms of mutation
Annu Rev Plant Biol. 68:17.1–17.28 doi:10.1146/annurev-arplant-043015-112232 Abstract
Moulinier L, Ripp R, Castillo G, Poch O, Sissler M (2017)
MiSynPat: An integrated knowledge base linking clinical, genetic, and structural data for disease-causing mutations in human mitochondrial aminoacyl-tRNA synthetases.
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Namer LS, Osman F, Banai Y, Masquida B, Jung R, Kaempfer R (2017)
An Ancient Pseudoknot in TNF-alpha Pre-mRNA Activates PKR, Inducing eIF2alpha Phosphorylation that Potently Enhances Splicing.
Cell Rep 20 (1):188-200. doi:10.1016/j.celrep.2017.06.035 Abstract
Paszkiewicz G, Gualberto JM, Benamar A, Macherel D, Logan DC (2017)
Arabidopsis Seed Mitochondria Are Bioenergetically Active Immediately upon Imbibition and Specialize via Biogenesis in Preparation for Autotrophic Growth.
The Plant cell 29 (1):109-128. doi:10.1105/tpc.16.00700 Abstract
Pinker F, Schelcher C, Fernandez-Millan P, Gobert A, Birck C, Thureau A, Roblin P, , Sauter C (2017)
Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding
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Salinas-Giegé T, Cavaiuolo M, Cognat V, Ubrig E, Remacle C, Duchêne AM, Vallon O, Maréchal-Drouard L.
Polycytidylation of mitochondrial mRNAs in Chlamydomonas reinhardtii.
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Sissler M, Gonzalez-Serrano LE, Westhof E (2017)
Recent Advances in Mitochondrial Aminoacyl-tRNA Synthetases and Disease.
Trends Mol Med 23 (8):693-708. doi:10.1016/j.molmed.2017.06.002 Abstract
Smirnov A, Schneider C, Hor J, Vogel J (2017)
Discovery of new RNA classes and global RNA-binding proteins.
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Vincent T, Vingadassalon A, Ubrig E, Azeredo K, Srour O, Cognat V, Graindorge V, Salinas, T, Maréchal-Drouard L, Duchêne AM.
A genome-scale analysis of mRNAs targeting to plant mitochondria : upstream AUGs in 5’-UTRs reduce mitochondrial association.
Plant J, 92(6):1132-1142. doi: 10.1111/tpj.13749. Abstract
Yakobov N, Debard S, Fischer F, Senger B, Becker HD
Cytosolic aminoacyl-tRNA synthetases: unanticipated relocations for unexpected functions.
Biochimica et biophysica acta. doi:10.1016/j.bbagrm.2017.11.004 Abstract
Bonnard G, Gobert A, Arrivé M, Pinker F, Salinas-Giegé T and Giegé P (2016)
Transfer RNA maturation in Chlamydomonas mitochondria, chloroplast and the nucleus by a single RNase P protein.
Plant J. 87 (3):270-280. doi:10.1111/tpj.13198 Abstract
Carapito C, Kuhn L, Karim L, Rompais M, Rabilloud T, Schwenzer H, Sissler M (2016)
Two proteomic methodologies for defining N-termini of mature human mitochondrial aminoacyl-tRNA synthetases.
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Cardi M, Zaffagnini M, De Lillo A, Castiglia G, Chibani K, Gualberto JM, Rouhier N, Jacquot JP, Esposito S (2016)
Plastidic P2 glucose-6P dehydrogenase from poplar is modulated by thioredoxin m-type: Distinct roles of cysteine residues in redox regulation and NADPH inhibition.
Plant Sci 252:257-266.
Cognat V, Morelle G, Megel C, Lalande S, Molinier J, Vincent T, Small I, Duchene AM, Maréchal-Drouard L (2016)
The nuclear and organellar tRNA-derived RNA fragment population in Arabidopsis thaliana is highly dynamic.
Nucleic acids research. doi:10.1093/nar/gkw1122 Abstract
Dovydenko I, Tarassov I, Venyaminova A, Entelis N (2016)
Method of carrier-free delivery of therapeutic RNA importable into human mitochondria: Lipophilic conjugates with cleavable bonds.
Biomaterials 76:408-417. Abstract
Fernandez-Millan P, Schelcher C, Chihade J, Masquida B, Giegé P, Sauter C (2016)
Transfer RNA: From pioneering crystallographic studies to contemporary tRNA biology.
Arch Biochem Biophys. doi:10.1016/j.abb.2016.03.005 Abstract
Fujii S, Suzuki T, Giegé P, Higashiyama T, Koizuka N, Shikanai T (2016)
The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis.
The Plant J. 86 (6):504-513. doi:10.1111/tpj.13185 Abstract
Ibrahim M, Gahoual R, Enkler L, Becker H, Chicher J, Hammann P, Francois YN, Kuhn L, Leize-Wagner E
Improvement of mitochondria extract from Saccharomyces cerevisiae characterization in shotgun proteomics using sheathless capillary electrophoresis coupled to tandem mass spectrometry.
Journal of chromatographic science. doi:10.1093/chromsci/bmw005. Abstract
Lallement PA, Roret T, Tsan P, Gualberto JM, Girardet JM, Didierjean C, Rouhier N, Hecker A (2016)
Insights into ascorbate regeneration in plants: investigating the redox and structural properties of dehydroascorbate reductases from Populus trichocarpa.
The Biochemical journal 473 (6):717-731. Abstract
Murcha MW, Kubiszewski-Jakubiak S, Teixeira PF, Gugel IL, Kmiec B, Narsai R, Ivanova A, Megel C, Schock A, Kraus S, Berkowitz O, Glaser E, Philippar K, Marechal-Drouard L, Soll J, Whelan J (2016) Plant-specific preprotein and amino acid transporter proteins are required for tRNA import into mitochondria.
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Mechanistic and structural studies of Protein-Only RNase P compared to ribonucleoproteins reveal the two faces of the same enzymatic activity.
Biomolecules 6 (3). doi:10.3390/biom6030030 Abstract
Smirnova EV, Chicherin IV, Baleva MV, Entelis NS, Tarassov IA, Kamenski PA (2016)
Procedure for Purification of Recombinant preMsk1p from E. coli Determines Its Properties as a Factor of tRNA Import into Yeast Mitochondria.
Biochemistry Biokhimiia 81 (10):1081-1088. doi:10.1134/S0006297916100060 Abstract
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EMPTY PERICARP16 is required for mitochondrial nad2 Intron 4 cis-splicing, complex I assembly and seed development in maize.
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Apostolidi M, Saad NY, Drainas D, Pournaras S, Becker HD, Stathopoulos C (2015)
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A Moonlighting Human Protein Is Involved in Mitochondrial Import of tRNA.
International journal of molecular sciences 16 (5):9354-9367. Abstract
Dietrich A, Wallet C, Iqbal RK, Gualberto JM, Lotfi F (2015)
Organellar non-coding RNAs: Emerging regulation mechanisms.
Biochimie 117, 48-62. Abstract
Doublet V, Ubrig E, Alioua A, Bouchon D, Marcade I, Marechal-Drouard L (2015)
Large gene overlaps and tRNA processing in the compact mitochondrial genome of the crustacean Armadillidium vulgare.
RNA biology 12 (10):1159-1168. Abstract
Dovydenko I, Heckel AM, Tonin Y, Gowher A, Venyaminova A, Tarassov I, Entelis N (2015)
Mitochondrial targeting of recombinant RNA.
Methods in molecular biology 1265: 209-225 . Abstract
Gualberto JM, Le Ret M, Beator B, Kuhn K (2015)
The RAD52-like protein ODB1 is required for the efficient excision of two mitochondrial introns spliced via first-step hydrolysis.
Nucleic acids research 43 (13):6500-6510. Abstract
Kubiszewski-Jakubiak S, Megel C, Ubrig E, Salinas T, Duchene A-M, Marechal-Drouard L (2015)
In vitro RNA uptake studies in plant mitochondria.
Methods in molecular biology (Clifton, N J ) 1305:45-6. Abstract
Lallement PA, Meux E, Gualberto JM, Dumarcay S, Favier F, Didierjean C, Saul F, Haouz A, Morel-Rouhier M, Gelhaye E, Rouhier N, Hecker A (2015)
Glutathionyl-hydroquinone reductases from poplar are plastidial proteins that deglutathionylate both reduced and oxidized glutathionylated quinones.
FEBS letters 589: 37-44. Abstract
Lechner M, Rossmanith W, Hartmann RK, Tholken C, Gutmann B, Giege P, Gobert A (2015)
Distribution of Ribonucleoprotein and Protein-Only RNase P in Eukarya.
Molecular biology and evolution 32 (12):3186-3193. Abstract
Megel C, Morelle G, Lalande S, Duchene AM, Small I, Marechal-Drouard L (2015)
Surveillance and Cleavage of Eukaryotic tRNAs.
Int. J. Mol. Sci. 16: 1873-1893. Abstract
Mileshina D, Niazi AK, Weber-Lotfi F, Gualberto J, Dietrich A (2015)
Mitochondrial Genetic Manipulation.
In:Somatic Genome Manipulation: Advances, Methods and Applications (Li XQ, Donnelly D, Jensen TG, eds) Chapter 13, pp. 275-321.Springer-Verlag, Berlin, Heidelberg, Germany.
Mileshina D, Niazi AK, Wyszko E, Szymanski M, Val R, Valentin C, Barciszewski J, Dietrich A (2015)
Mitochondrial targeting of catalytic RNAs.
Methods Mol. Biol. 1265, 227-254.
Pinker F, Giegé P, Sauter C (2015)
Crystallization and crystallographic analysis of an Arabidopsis nuclear proteinaceous RNase P
Acta Cristallogr F Struct Mol Commun. 71 : 1372-1377. Abstract
Salinas-Giegé T, Giegé R, Giegé P (2015)
tRNA biology in mitochondria.
Int. J. Mol. Sci. 16: 4518-4559. Abstract
Sauter C, Lorber B, Gaudry A, Karim L, Schwenzer H, Wien F, Roblin P, Florentz C and Sissler M (2015).
Neurodegenerative disease-associated mutants of a human mitochondrial aminoacyl-tRNA synthetase present individual molecular signatures.
Scientific Reports, 5:17332. Abstract
Scotti N, Sannino L, Idoine A, Hamman P, De Stradis A, Giorio P, Marechal-Drouard L, Bock R, Cardi T (2015) The HIV-1 Pr55 gag polyprotein binds to plastidial membranes and leads to severe impairment of chloroplast biogenesis and seedling lethality in transplastomic tobacco plants.
Transgenic research 24 (2):319-33. Abstract
Simon M, Richard EM, Wang X, Shahzad M, Huang VH, Qaiser TA, Potluri P, Mahl SE, Davila A, Nazli S, Hancock S, Yu M, Gargus J, Chang R, Al-sheqaih N, Newman WG, Abdenur J, Starr A, Hegde R, Dorn T, Busch A, Park E, Wu J, Schwenzer H, Flierl A, Florentz C, Sissler M, Khan SN, Li R, Guan M-X, Friedman TB, Wu DK, Procaccio V, Riazuddin S, Wallace DC, Ahmed ZM, Huang T, Riazuddin S (2015)
Mutations of human NARS2, encoding the mitochondrial asparaginyl-tRNA synthetase, cause nonsyndromic deafness and Leigh Syndrome.
Plos Genetics 11(3):e1005097. Abstract
Sun F, Wang X, Bonnard G, Shen Y, Xiu Z, Li X, Gao D, Zhang Z, Tan BC (2015)
Empty pericarp7 encodes a mitochondrial E-subgroup pentatricopeptide repeat protein that is required for ccmF editing, mitochondrial function and seed development in maize.
The Plant journal 84 (2):283-295. Abstract
Wallet C, Le Ret M, Bergdoll M, Bichara M, Dietrich A, Gualberto JM (2015)
The RECG1 DNA translocase is a key factor in recombination surveillance, repair and segregation of the mitochondrial DNA in Arabidopsis.
Plant Cell 27, 2907-2925. Abstract
Weber-Lotfi F, Koulintchenko MV, Ibrahim N, Hammann P, Mileshina DV, Konstantinov YM, Dietrich A (2015)
Nucleic acid import into mitochondria: New insights into the translocation pathways.
Biochim. Biophys. Acta 1853, 3165-3181. Abstract
Araiso Y., Huot J.L., Skiguchi T., Frechin M., Fischer F., Enkler L., Senger B., Ishitani R., Becker, H.D., NurekiO. (2014).
Crystal structure of Saccharomyces cerevisiae mitochondrial GatFAB reveals a novel subunit assembly in tRNA-dependent amidotransferases.
Nucleic Acids Res. 42, 6052-6063. Abstract
Atkinson GC, Kuzmenko A, Chicherin I, Soosaar A, Tenson T, Carr M, Kamenski P, Hauryliuk V (2014)
An evolutionary ratchet leading to loss of elongation factors in eukaryotes.
BMC evolutionary biology 14: 35
Couturier J., Wu H.C., Dhalleine T., Pégeot H., Sudre D., Gualberto J.M., Jacquot J.P., Gaymard F., Vignols F. and Rouhier N. (2014).
Monothiol glutaredoxin-BolA interactions: redox control of Arabidopsis thaliana BolA2 and SufE1.
Mol. Plant 7, 187-205. Abstract
Frechin M, Enkler L, Tetaud E, Laporte D, Senger B, Blancard C, Hammann P, Bader G, Clauder-Munster S, Steinmetz LM, Martin RP, di Rago J, Becker HD (2014)
Expression of Nuclear and Mitochondrial Genes Encoding ATP Synthase Is Synchronized by Disassembly of a Multisynthetase Complex.
Molecular cell 56: 763-776
Gonzalez, D.H. and Giegé P. (2014)
Biogenesis of the oxidative phosphorylation machinery in plants. From gene expression to complex assembly.
Frontiers in Plant Physiol. 5, 225. Abstract
Gualberto J.M. and Kühn K. (2014).
DNA-binding proteins in plant mitochondria: Implications for transcription.
Mitochondrion, doi:10.1016/j.mito.2014.02.004. Abstract
Gualberto J.M., Mileshina D., Wallet C., Niazi A.K., Weber-Lotfi F. and Dietrich A. (2014).
The plant mitochondrial genome: dynamics and maintenance.
Biochimie 100: 107-120. Abstract
Hammani K, Barkan A (2014)
An mTERF domain protein functions in group II intron splicing in maize chloroplasts.
Nucleic acids research 42: 5033-5042
Hammani K, Bonnard G, Bouchoucha A, Gobert A, Pinker F, Salinas T, Giegé P (2014)
Helical repeats modular proteins are major players for organelle gene expression.
Biochimie 100: 141-150
Hammani K., Giegé P. (2014).
RNA metabolism in plant mitochondria.
Trends Plant Sci. 19, 380-389. Abstract
Huot J.L., Enkler L., Megel C., Karim L., Laporte D., Becker H., Duchêne A.M., Sissler M. and Maréchal-Drouard L. (2014).
Idiosyncrasies in decoding mitochondrial genomes.
Biochimie 100, 95-106. Abstract
Kondo J., Sauter C. and Masquida B. (2014).
RNA Crystallization. In Handbook of RNA biochemistry: Second, Completely Revised and Enlarged Edition (Hartmann, R.K., Bindereif, A., Schön, A., Westhof, E., eds.) pp. 481-498.
Wiley-VCH. Abstract
Koulintchenko M.V., Ibrahim N., Klimenko E.S., Konstantinov Yu.M., Weber-Lotfi F. and Dietrich A. (2014).
Specificity of DNA import into isolated mitochondria from plants and mammals.
Biopolym. Cell 30: 68-70.
Kuzmenko A, Atkinson GC, Levitskii S, Zenkin N, Tenson T, Hauryliuk V, Kamenski P (2014)
Mitochondrial translation initiation machinery: conservation and diversification.
Biochimie 100: 132-140
Lallement P.A., Meux E., Gualberto J.M., Prosper P., Didierjean C., Saul F., Haouz A., Rouhier N., Hecker A. (2014).
Structural and enzymatic insights into Lambda glutathione transferases from Populus trichocarpa, monomeric enzymes constituting an early divergent class specific to terrestrial plants.
Biochem J., doi:10.1042/BJ20140390. Abstract
Laporte D, Huot JL, Bader G, Enkler L, Senger B, Becker HD (2014)
Exploring the evolutionary diversity and assembly modes of multi-aminoacyl-tRNA synthetase complexes: Lessons from unicellular organisms.
FEBS letters 588: 4268-4278
Maréchal-Drouard L., Sissler M. and Tarassov I., Eds. (2014).
Mitochondria: An organelle for life.
Biochimie. Elsevier. Abstract
Meyer M, Masquida B (2014)
cis-Acting 5' hammerhead ribozyme optimization for in vitro transcription of highly structured RNAs.
Methods in molecular biology 1086: 21-40 Abstract
Meyer M., Nielsen H., Oliéric V., Roblin P., Johansen S.D., Westhof E., Masquida B. (2014).
Speciation of a group I intron into a lariat capping ribozyme.
Proc. Natl. Acad. Sci. USA 111, 7659-64. Abstract
Michaud M., Ubrig E., Filleur S., Erhardt M., Ephritikhine G., Marechal-Drouard L. and Duchene A. M. (2014).
Differential targeting of VDAC3 mRNA isoforms influences mitochondria morphology.
Proc Natl Acad Sci U.S.A., 111:8991-6. Abstract
Press Release @ INSB website
Michaud M., Maréchal-Drouard L. and Duchêne A.M. (2014).
Targeting of cytosolic mRNA to mitochondria : naked RNA can bind to the mitochondrial surface.
Biochimie, 100:159-166, 2014. Abstract
Patrushev MV, Kamenski PA, Mazunin IO (2014)
Mutations in mitochondrial DNA and approaches for their correction.
Biochemistry. Biokhimiia 79: 1151-1160
Salinas T, El Farouk-Ameqrane S, Ubrig E, Sauter C, Duchene AM, Marechal-Drouard L (2014)
Molecular basis for the differential interaction of plant mitochondrial VDAC proteins with tRNAs.
Nucleic acids research 42: 9937-9948 Abstract
Salinas T., Larosa V., Cardol P., Maréchal-Drouard L. and Remacle C. (2014).
Respiratory-deficient mutants of the unicellular green alga Chlamydomonas : A review.
Biochimie, 100:207-218, 2014. Abstract
Schwenzer H, Scheper GC, Zorn N, Moulinier L, Gaudry A, Leize E, Martin F, Florentz C, Poch O, Sissler M (2014)
Released selective pressure on a structural domain gives new insights on the functional relaxation of mitochondrial aspartyl-tRNA synthetase.
Biochimie 100: 18-26 Abstract
Schwenzer H, Zoll J, Florentz C, Sissler M (2014)
Pathogenic implications of human mitochondrial aminoacyl-tRNA synthetases.
In: Kim S (ed) Topics in Current Chemistry-Aminoacyl-tRNA Synthetases: Applications in Chemistry, Biology and Medicine. Springer, pp 247-292
Scotti N, Sannino L, Idoine A, Hamman P, De Stradis A, Giorio P, Marechal-Drouard L, Bock R, Cardi T (2014) The HIV-1 Pr55 polyprotein binds to plastidial membranes and leads to severe impairment of chloroplast biogenesis and seedling lethality in transplastomic tobacco plants. Transgenic research
Tang Y, Nielsen H, Masquida B, Gardner PP, Johansen SD (2014)
Molecular characterization of a new member of the lariat capping twin-ribozyme introns.
Mobile DNA 5: 25
Tonin Y, Entelis N (2014)
Maladies Mitochondriales et Stratégies Thérapeutiques.
Sci. Med., 30 (12) :1101-9
Tonin Y., Heckel A.-M., Vysokikh M., Dovydenko I., Meschaninova M., Rötig A., Munnich A. , Venyaminova A., Tarassov I., Entelis N. (2014).
Modelling of antigenomic therapy of mitochondrial diseases by mitochondrially addressed RNA targeting a pathogenic point mutation in mtDNA.
J. Biol. Chem. 289, 13323-34. Abstract
Tonin Y., Heckel A.-M., Dovydenko I., Meschaninova M., Comte C., Venyaminova A., Pyshnyi D., Tarassov I., Entelis N. (2014).
Characterization of chemically modified oligonucleotides targeting a pathogenic mutation in human mitochondrial DNA.
Biochimie 100, 192-9. Abstract
Weber-Lotfi F., Mileshina D.V., Ibrahim N., Koulintchenko M.V., D'Souza G.G.M., Saxena V., Konstantinov Yu.M., Lightowlers R.N. and Dietrich A. (2014)
DNA import competence and mitochondrial genetics.
Biopolym. Cell 30: 71-73.
Wende S., Platzer E.G., Jühling F., Pütz J., Florentz C., Stadler P.F. and Mörl M. (2014).
Biological evidence for the world's smallest tRNAs.
Biochimie 100, 151-158. Abstract
Wolff P, Amal I, Olieric V, Chaloin O, Gygli G, Ennifar E, Lorber B, Guichard G, Wagner J, Dejaegere A, Burnouf D (2014)
Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J. Med. Chem. 57: 7565-7576
Bannwarth S., Procaccio V., Lebre A.S., Jardel C., Chaussenot A., Hoarau C., Maoulida H., Charrier N., Gai X., Xie H.M., Ferre M., Fragaki K., Hardy G., Mousson de Camaret B., Marlin S., Dhaenens C.M., Slama A., Rocher C., Paul Bonnefont J.,Rötig A., Aoutil N., Gilleron M., Desquiret-Dumas V., Reynier P., Ceresuela J., Jonard L., Devos A., Espil-Taris C., Martinez D., Gaignard P., Le Quan Sang K.H., Amati-Bonneau P., Falk M.J., Florentz C., Chabrol B., Durand-Zaleski I., Paquis-Flucklinger V. (2013).
Prevalence of rare mitochondrial DNA mutations in mitochondrial disorders.
J Med Genet, in press. Abstract
Bernt M., Donath A., Juhling F., Externbrink F., Florentz C., Fritzsch G., Putz J., Middendorf M. and Stadler P.F. (2013).
MITOS: Improved de novo metazoan mitochondrial genome annotation.
Mol Phylogenet Evol, 69(2), 313-9. Abstract
Cognat V., Pawlak G., Duchêne A.M., Daujat M., Gigant A., Salinas T., Michaud M., Gutmann B., Giegé P., Gobert A. and Marechal-Drouard L.
Plant RNA a database for tRNAs of photosynthetic eukaryotes.
Nucleic Acids Res., 41:273-279, 2013. Abstract
Comte C, Tonin Y, Heckel-Mager AM, Boucheham A, Smirnov A, Aure K, Lombes A, Martin RP, Entelis N, Tarassov I (2013)
Mitochondrial targeting of recombinant RNAs modulates the level of a heteroplasmic mutation in human mitochondrial DNA associated with Kearns Sayre Syndrome.
Nucleic acids research 41: 418-433
Cumbo A., Lorber B., Corvini P.F., Meier W. and Shahgaldian P. (2013).
A synthetic nanomaterial for virus recognition produced by surface imprinting.
Nat Commun 4, 1503. Abstract
Florentz C, Pütz J, Jühling F, Schwenzer H, Stadler P, Lorber B, Sauter C, Sissler M (2013)
Translation in mammalian mitochondria (part B): Order and disorder linked to tRNAs and aminoacyl-tRNA synthetases.
In: Duchêne A-M (ed) Translation in mitochondria and other organelles. Springer
Giegé P.
Pentatricopeptide repeat proteins: a set of modular RNA specific binders massively used for organelle gene expression.
RNA Biol., 14(9):1417-1418, 2013. Abstract
Gobert A, Pinker F, Fuchsbauer O, Gutmann B, Boutin R, Roblin P, Sauter C, Giegé P. (2013).
Structural insights into protein-only RNase P complexed with tRNA.
Nat Commun 4, 1353. Full text
Gowher A, Smirnov A, Tarassov I, Entelis N (2013)
Induced tRNA import into human mitochondria: implication of a host aminoacyl-tRNA-synthetase.
PloS one 8: e66228
Michely S., Toulza E., Subirana L., Uwe J., Cognat V., Maréchal-Drouard L., Grimsley N., Moreua H. and Piganeau G. (2013)
Evolution of Codon Usage In The Smallest Photosynthetic Eukaryotes And Their Giant Viruses.
Genome Biol Evol, 5(5):848-859. Abstract
Neuenfeldt A., Lorber B., Ennifar E., Gaudry A., Sauter C., Sissler M. and Florentz C. (2013).
Thermodynamic properties distinguish human mitochondrial aspartyl-tRNA synthetase from bacterial homolog with same 3D architecture.
Nucleic Acids Res 41(4), 2698-708. Abstract
Niazi AK, Mileshina D, Cosset A, Val R, Weber-Lotfi F, Dietrich A (2013) Targeting nucleic acids into mitochondria: Progress and prospects. Mitochondrion 13: 548–558 Abstract
Nozawa K., Ishitani R., Yoshihisa T., Sato M., Arisaka F., Kanamal S., Dohmae N., Mangroo D., Senger B., Becker H.D., Nureki, O. (2013).
Crystal structure of Cex1p reveals the mechanism of tRNA trafficking between nucleus and cytoplasm.
Nucleic Acids Res. 41, 3901-3914. Abstract
Pinker F, Bonnard G, Gobert A, Gutmann B, Hammani K, Sauter C, Gegenheimer PA, Giegé P (2013)
PPR proteins shed a new light on RNase P biology.
RNA biology 10: 1457-1468 Abstract
Pinker F, Brun M, Morin P, Deman AL, Chateaux JF, Oliéric V, Stirnimann C, Lorber B, Terrier N, Ferrigno R, Sauter C (2013)
ChipX: a novel microfluidic chip for counter-diffusion crystallization of biomolecules and in situ crystal analysis at room temperature.
Crystal Growth & Design 13: 3333–3340
Saad Y.N., Stamatopoulou V., Brayé M., Drainas D., Stathopoulos C., Becker H.D. (2013).
Two-codon T-Box riboswitch binding two tRNAs.
Proc. Natl. Acad. Sci. U. S. A. 110, 12756-12761. Abstract
Salinas T., Remacle C. and Maréchal-Drouard L.. (2013)
Mitochondrial translation in green algae and higher plants.
volume Springer, Heidelberg New York Dordrecht London.
Sissler M, Schwenzer H, Scheper G, Zorn N, Moulinier L, Gaudry A, Leize E, Martin F, Florentz C, Poch O (2013)
Evolutionary decline for a nuclear-encoded human mitochondrial aminoacyl-tRNA synthetase.
FEBS Journal 280: 543-544
Tarassov I, Chicherin I, Tonin Y, Smirnov A, Kamenski P, Entelis N (2013)
Mitochondrial targeting of RNA and mitochondrial translation.
In: Duchene A-M (ed) Translation in mitochondria and other organelles. Springer-Verlag Berlin Heidelberg, pp 85-107
van Berge L., Kevenaar J., Polder E., Gaudry A., Florentz C., Sissler M., van der Knaap M.S. and Scheper G.C. (2013).
Pathogenic mutations causing LBSL affect mitochondrial aspartyl-tRNA synthetase in diverse ways.
Biochem J 450(2), 345-50. Abstract
Zhang H., Endrizzi J.A., Shu Y., Haque F., Sauter C., Shlyakhtenko L.S., Lyubchenko Y., Guo P. and Chi Y.I. (2013).
Crystal structure of 3WJ core revealing divalent ion-promoted thermostability and assembly of the Phi29 hexameric motor pRNA.
RNA 19(9), 1226-37. Abstract
Atkinson GC, Kuzmenko A, Kamenski P, Vysokikh MY, Lakunina V, Tankov S, Smirnova E, Soosaar A, Tenson T, Hauryliuk V. (2012)
Evolutionary and genetic analyses of mitochondrial translation initiation factors identify the missing mitochondrial IF3 in S. cerevisiae.
Nucleic Acids Res. 40 (13), 6122-6134. Abstract
Belostotsky R, Frishberg Y, Entelis N (2012)
Human mitochondrial tRNA quality control in health and disease: a channelling mechanism?
RNA biology 9: 33-39 Abstract
Chibani K, Tarrago L, Gualberto JM, Wingsle G, Rey P, Jacquot JP, Rouhier N (2012)
Atypical thioredoxins in poplar: the glutathione-dependent thioredoxin-like 2.1 supports the activity of target enzymes possessing a single redox active cysteine.
Plant physiology 159: 592-605
Dietrich A, Mileshina D, Niazi AK, Cosset A, Val R, Ibrahim N, Weber-Lotfi F (2012)
Manipulating the mitochondrial genetic system
In: Poindron P, Piguet P (eds) Genetically Modified Organisms and Genetic Engineering in Research and Therapy, BioValley Monographs Karger Medical and Scientific, Basel, Switzerland, pp 103-119
Dietrich A, Rolle K, Gabryelska M, Wyszko E, Val R, Szymanski M, Valentin C, Cosset A, Barciszewski J (2012)
RNA technologies for mitochondrial genetics.
In: Erdmann VA, Barciszewski J (eds) RNA Technologies - From Nucleic Acids Sequences to Molecular Medicine. Springer-Verlag, Berlin, Heidelberg, Germany, pp 313-356
Duchene AM, Giegé P (2012)
Dual localized mitochondrial and nuclear proteins as gene expression regulators in plants?
Frontiers in plant science 3: 221 Abstract
Fischer F., Huot J.L., Lorber B., Diss G., Hendrickson T.L., Becker H.D., Lapointe, J., Kern, D. (2012).
The asparagine-transamidosome from Helicobacter pylori: a dual-kinetic mode in non-discriminating aspartyl-tRNA synthetase safeguards the genetic code.
Nucleic Acids Res. 40, 4965-4976. Abstract
Gaudry A, Lorber B, Messmer M, Neuenfeldt A, Sauter C, Florentz C, Sissler M (2012) Redesigned N-terminus enhances expression, solubility, and crystallisability of mitochondrial enzyme. Protein Engineering, Design and Selection 25: 473-481 Abstract
Giege R., Jühling F., Pütz J., Stadler P., Sauter C. and Florentz C. (2012).
Structure of transfer RNAs: similarity and variability.
Wiley Interdiscip Rev RNA 3(1), 37-61. Abstract
Gutmann B., Gobert A. and Giegé P. (2012).
PRORP proteins support RNase P activity in both organelles and the nucleus in Arabidopsis.
Genes & Dev., 26: 1022-1027. Abstract
Gutmann B, Gobert A, Giegé P (2012)
Mitochondrial genome evolution and the emergence of PPR proteins.
Advances in botanical research. Vol. Mitochondrial genome evolution (Elsevier). Mitochondrial genome evolution. Ed. by L. Drouard. : 253-313
Janicka S, Kuhn K, Le Ret M, Bonnard G, Imbault P, Augustyniak H, Gualberto JM (2012)
A RAD52-like single-stranded DNA binding protein affects mitochondrial DNA repair by recombination.
The Plant journal : for cell and molecular biology 72: 423-435
Jühling F., Pütz J., Florentz C. and Stadler P.F. (2012).
Armless mitochondrial tRNAs in enoplea (nematoda).
RNA Biol 9(9), 1161 - 1166. Abstract
Jühling F., Pütz J., Bernt M., Donath A., Middendorf M., Florentz C. and Stadler P.F. (2012).
Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements.
Nucleic Acids Res 40(7), 2833-2845. Abstract
Kanga S, Bernard D, Mager-Heckel AM, Erpapazoglou Z, Mattiroli F, Sixma TK, Leon S, Urban-Grimal D, Tarassov I, Haguenauer-Tsapis R (2012)
A deubiquitylating complex required for neosynthesis of a yeast mitochondrial ATP synthase subunit.
PloS one 7: e38071 Abstract
Koulintchenko MV, Dietrich A, Konstantinov YM (2012)
Mitochondrial genetic transformation via biotechnological approaches or natural competence mechanism: do we have a choice?
Biopolym. Cell 28: 261–266
Lorber B., Fischer F., Bailly M., Roy H. and Kern D. (2012).
Protein Analysis by Dynamic Light Scattering: Methods and Techniques for Graduate Students.
Biochemistry and Molecular Biology Education, in press.
Maréchal-Drouard L (ed.)(2012).
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Michaud M, Duchêne AM (2012).
Macromolecules trafficking to plant mitochondria.
In Mitochondrial Genome Evolution. Advances in Botanical Research. L. Maréchal-Drouard (ed.) Elsevier, Amsterdam. Vol 63, pp 316-347.
Remacle C., Hamel P., Larosa V., Salinas T., Subramanian N., Bonnefoy N., Kempken F. (2012).
Transformation and nucleic acid delivery to mitochondria. In Genomics of chloroplasts and mitochondria. R. Bock (ed) Vol 35: 443-458.
Robert N., d'Erfuth I., Marmagne A., Erhardt M., Allot M., Gissot L., Monachello D., Michaud M., Duchêne A.M.,Barbier-Brygoo H., Maréchal-Drouard L., Ephritikhine G. and Filleur S. (2012).
Voltage dependent anion channels (VDACs) in Arabidopsis have a dual localization in the cell but show a disctrinct role in mitochondria.
Plant Mol. Biol., 78: 431-446. Abstract
Saad N.Y., Schiel B., Brayé M., Heap J.T., Minton N.P., Dürre P., Becker, H. D. (2012)
Riboswitch (T-box)-mediated Control of tRNA-dependent Amidation in Clostridium acetobutylicum Rationalizes Gene and Pathway Redundancy for Asparagine and Asparaginyl-tRNAAsn Synthesis.
J. Biol. Chem. 287, 20382-20394. Abstract
Salinas T, Duby F, Larosa V, Coosemans N, Bonnefoy N, Motte P, Maréchal-Drouard L and Remacle C (2012).
Co-evolution of mitochondrial tRNA import and codon usage determines translational efficiency in the green alga Chlamyodomonas reinhardtii.
Plos Genet, 8(9):e1002946. Abstract
Sánchez-Puig N., Sauter C., Lorber B., Giegé R. and Moreno A. (2012).
Predicting Protein Crystallizability and Nucleation.
Protein Pept Lett 19(7), 725-731. Abstract
Sauter C., Lorber B., McPherson A. and Giegé R. (2012).
Part 4. Crystallization. Chapter 4.1. General methods.
In International Tables for Crystallography (Arnold, E., Himmel, D.M., Rossmann, M., eds.) Vol. F: Crystallography of biological macromolecules, 2nd ed., pp. 99-121. Wiley, Chichester. Full text
Smirnova EV, Lakunina VA, Tarassov I, Krasheninnikov IA, Kamenski PA (2012)
Noncanonical functions of aminoacyl-tRNA synthetases. Biochemistry.
Biokhimiia 77: 15-25 Abstract
Vedrenne V, Gowher A, De Lonlay P, Nitschke P, Serre V, Boddaert N, Altuzarra C, Mager-Heckel AM, Chretien F, Entelis N, Munnich A, Tarassov I, Rotig A (2012)
Mutation in PNPT1, which encodes a polyribonucleotide nucleotidyltransferase, impairs RNA import into mitochondria and causes respiratory-chain deficiency.
American journal of human genetics 91: 912-918
The MitoCross research cluster wishes to welcome one junior chair in Strasbourg. The chair will be...